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bowtie-examples - Examples for bowtie, the ultrafast memory-efficient short read aligner

This package addresses the problem to interpret the results from the latest (2010) DNA sequencing technologies. Those will yield fairly short stretches and those cannot be interpreted directly. It is the challenge for tools like Bowtie to give a chromosomal location to the short stretches of DNA sequenced per run.
Bowtie aligns short DNA sequences (reads) to the human genome at a rate of over 25 million 35-bp reads per hour. Bowtie indexes the genome with a Burrows-Wheeler index to keep its memory footprint small: typically about 2.2 GB for the human genome (2.9 GB for paired-end).
This package provides some example data to work with bowtie.
1.2.3
Ubuntu iconUbuntu 19.10
1.2.2
Debian iconDebian 10.0
Ubuntu iconUbuntu 18.04 LTS
Ubuntu iconUbuntu 18.10
Ubuntu iconUbuntu 19.04
1.2.0
Ubuntu iconUbuntu 17.10
1.1.2
Debian iconDebian 9.0
Ubuntu iconUbuntu 16.04 LTS
DistributionVersionSincePackageInstalledPackager
Debian iconDebian 10.0 buster/maindeb1.2.2+dfsg-4Jan 126.01 MiB6.61 MiB
Debian iconDebian 9.0 stretch/maindeb1.1.2-62017-11-106.01 MiB6.6 MiB
Ubuntu iconUbuntu 17.10 artful/universedeb1.2.0+dfsg-12017-11-106.01 MiB6.6 MiB
Ubuntu iconUbuntu 18.04 LTS bionic/universedeb1.2.2+dfsg-22018-02-016.01 MiB6.61 MiB
Ubuntu iconUbuntu 18.10 cosmic/universedeb1.2.2+dfsg-3Jan 146.01 MiB6.61 MiB
Ubuntu iconUbuntu 19.04 disco/universedeb1.2.2+dfsg-4Jan 146.01 MiB6.61 MiB
Ubuntu iconUbuntu 19.10 eoan/universedeb1.2.3+dfsg-1Jul 126.01 MiB6.61 MiB
Ubuntu iconUbuntu 16.04 LTS xenial/universedeb1.1.2-32017-11-106.01 MiB6.6 MiB

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Related packages

bowtie - Ultrafast memory-efficient short read aligner
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