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python-htseq - Python high-throughput genome sequencing read analysis utilities

HTSeq can be used to performing a number of common analysis tasks when working with high-throughput genome sequencing reads:
  • Getting statistical summaries about the base-call quality scores to study the data quality.
  • Calculating a coverage vector and exporting it for visualization in a genome browser.
  • Reading in annotation data from a GFF file.
  • Assigning aligned reads from an RNA-Seq experiments to exons and genes.
This package contains the Python 2 module.
0.11.2
Debian iconDebian 10.0
Ubuntu iconUbuntu 19.04
Ubuntu iconUbuntu 19.10
0.10.0
Ubuntu iconUbuntu 18.10
0.6.1p1
Debian iconDebian 9.0
Ubuntu iconUbuntu 17.10
Ubuntu iconUbuntu 18.04 LTS
0.5.4p3
Ubuntu iconUbuntu 16.04 LTS
DistributionVersionSincePackageInstalledPackager
Debian iconDebian 10.0 buster/maindeb0.11.2-1Jan 17226 kiB791 kiB
Debian iconDebian 9.0 stretch/maindeb0.6.1p1-42017-11-10183 kiB648 kiB
Ubuntu iconUbuntu 17.10 artful/universedeb0.6.1p1-4build12017-11-10198 kiB690 kiB
Ubuntu iconUbuntu 18.04 LTS bionic/universedeb0.6.1p1-4build12017-11-10198 kiB690 kiB
Ubuntu iconUbuntu 18.10 cosmic/universedeb0.10.0-1build1Jan 14224 kiB782 kiB
Ubuntu iconUbuntu 19.04 disco/universedeb0.11.2-1Jan 14226 kiB791 kiB
Ubuntu iconUbuntu 19.10 eoan/universedeb0.11.2-1Jun 17226 kiB791 kiB
Ubuntu iconUbuntu 16.04 LTS xenial/universedeb0.5.4p3-22017-11-10199 kiB660 kiB

Latest updates

Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 reintroduced

Oct 10
  • New upstream version
  • debhelper 12
  • Standards-Version: 4.3.0
  • Secure URI in copyright format
  • Drop ancient X-Python-Version field
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 removed

Oct 10
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 reintroduced

Oct 10
  • New upstream version
  • debhelper 12
  • Standards-Version: 4.3.0
  • Secure URI in copyright format
  • Drop ancient X-Python-Version field
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 removed

Oct 10
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 reintroduced

Sep 25
  • New upstream version
  • debhelper 12
  • Standards-Version: 4.3.0
  • Secure URI in copyright format
  • Drop ancient X-Python-Version field
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 removed

Sep 25
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 reintroduced

Sep 25
  • New upstream version
  • debhelper 12
  • Standards-Version: 4.3.0
  • Secure URI in copyright format
  • Drop ancient X-Python-Version field
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 removed

Sep 25
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 reintroduced

Sep 06
  • New upstream version
  • debhelper 12
  • Standards-Version: 4.3.0
  • Secure URI in copyright format
  • Drop ancient X-Python-Version field
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 removed

Sep 06
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 reintroduced

Sep 06
  • New upstream version
  • debhelper 12
  • Standards-Version: 4.3.0
  • Secure URI in copyright format
  • Drop ancient X-Python-Version field
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 removed

Sep 06
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 reintroduced

Sep 06
  • New upstream version
  • debhelper 12
  • Standards-Version: 4.3.0
  • Secure URI in copyright format
  • Drop ancient X-Python-Version field
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 removed

Sep 06
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 reintroduced

Sep 06
  • New upstream version
  • debhelper 12
  • Standards-Version: 4.3.0
  • Secure URI in copyright format
  • Drop ancient X-Python-Version field
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 removed

Sep 06
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 reintroduced

Sep 06
  • New upstream version
  • debhelper 12
  • Standards-Version: 4.3.0
  • Secure URI in copyright format
  • Drop ancient X-Python-Version field
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 removed

Sep 06
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 reintroduced

Sep 05
  • New upstream version
  • debhelper 12
  • Standards-Version: 4.3.0
  • Secure URI in copyright format
  • Drop ancient X-Python-Version field
Ubuntu 19.10 icon

Ubuntu 19.10 eoan/universe: Version 0.11.2-1 removed

Sep 05

Related packages

python - interactive high-level object-oriented language (default version)
python-htseq-doc - documetation for HTSeq (high-throughput genome sequencing)
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